Participants - BioGen 2025¶

hltcoe-rerank¶

• Name: Dylan Ju
• Organization: JHU HLTCOE SCALE25 rerank
• Runs: hltbio-gpt5.searcher | hltbio-lg.crux | hltbio-lg.listllama | hltbio-lg.jina | hltbio-lg.qwen | hltbio-lg.jina.qwen | hltbio-lg-fsrrf | hltbio-lg.fsrrfprf | hltbio-lg.searcher | hltcoe-rerank.llama70B.lg-w-ret_plq-nt-s_cite

CLaC¶

• Name: Harikrishnan Gurushankar Saisudha
• Organization: Computational Linguistics at Concordia
• Runs: simpleQA_BM25 | simpleQA_hybrid | MedHopQA_BM25 | MedHopQA_FAISS | LLM_BM25 | LLM_NLI_BM25

SIB¶

• Name: Luc Mottin
• Organization: Swiss Institute of Bioinformatics
• Runs: SIB-task-a-3 | SIB-task-a-4 | SIB-task-a-2 | SIB-task-a-1 | SIB-task-a-6 | SIB-task-a-5 | SIB-task-a-7 | SIB-task-b-1 | SIB-task-b-2 | SIB-task-b-3 | SIB-task-b-4

uniud¶

• Name: Riccardo Lunardi
• Organization: University of Udine
• Runs: run1_no-rerank_index-passages-sparse_Llama-3.1-8B-Instruct | run2_rerank_index-passages-sparse_Llama-3.1-8B-Instruct | run3_no_rerank_index-passages-dense_Llama-3.1-8B-Instruct | run4_rerank_index-passages-dense_Llama-3.1-8B-Instruct | run6_rerank_index-passages-sparse_Llama-3.3-70B-Instruct | run5_no_rerank_index-passages-sparse_Llama-3.3-70B-Instruct | run7_no_rerank_index-passages-dense_Llama-3.3-70B-Instruct | run8_rerank_index-passages-dense_Llama-3.3-70B-Instruct | run9_no_rerank_index-passages-sparse_gpt-4o-mini | run10_no_rerank_index-passages-dense_gpt-4o-mini | run1_no-rerank_index-passages-sparse | run2_rerank_index-passages-sparse | run3_no-rerank_index-passages-dense | run4_rerank_index-passages-dense

h2oloo¶

• Name: Jimmy Lin
• Organization: University of Waterloo
• Runs: h2oloo_rr_q3-30b_t50 | h2oloo_rr_g41_t50 | h2oloo_rr_q3-30b_t20 | h2oloo_rr_q3-30b_nc

dal¶

• Name: Jitansh Arora
• Organization: Dalhousie University
• Runs: rrf_monot5-msmarco_deepseek-r1 | rrf_monot5-msmarco_llama70b | rmmdn | rmmln | afmmdn | afmmd | expd | empd | expert_prompt | emotional_prompt

InfoLab¶

• Name: Damian Martinez
• Organization: University of Delaware
• Runs: task_a_run6_A | task_a_run2 | task_a_run1 | task_b_run4 | task_a_run3 | task_b_run4_B | task_b_run1 | task_b_run5 | task_a_run4 | task_b_output_reranker_sum

CLaC Lab¶

• Name: Ganesh Chandrasekar
• Organization: Computational Linguistics at Concordia
• Runs: system_a | system_b_tfidf | system_c_medcpt | system_d_medcpt_wide | system_e

UAmsterdam¶

• Name: Jaap Kamps
• Organization: University of Amsterdam
• Runs: UAmsterdam_bergen | UAmsterdam_bergen_llama-8b | UAmsterdam_bergen_llama-70b | UAmsterdam_bergen_mistral-7b | UAmsterdam_bergen_pisco-llama | UAmsterdam_bergen_pisco-mistral

hltcoe-multiagt¶

• Name: Dawn Lawrie
• Organization: JHU HLTCOE SCALE25 gen multiagent
• Runs: hltcoe-multiagt.llama70B.ag_sw-ret_plq-6-wbg-limit | hltcoe-multiagt.llama70B.lg-w-ret_lpq-nt-s_cite | hltcoe-multiagt.llama70B.lg-w-ret_p-nt-s_cite

polito¶

• Name: Daniele Rege Cambrin
• Organization: Politecnico di Torino
• Runs: scifive-ft-512CL-lex

GEHC-HTIC¶

• Name: Soumya Sahoo
• Organization: GE Healthcare
• Runs: gehc_htic_task_a | gehc_htic_task_b | task_a_gehc_htic_run2

EvalHLTCOE¶

• Name: Will Walden
• Organization: Human Language Technology Center of Excellence - Evaluation Team
• Runs: hltcoe-eval-common-smoothed-sonnet | hltcoe-eval-svc-smoothed-sonnet