Index _ | A | B | C | D | E | F | G | H | I | J | L | M | N | O | P | R | S | T | U | V | W | X | Z _ __call__() (lnpy.segment.BuildPhases_dmu method) (lnpy.segment.BuildPhases_mu method) (lnpy.segment.BuildPhasesBase method) (lnpy.stability.Binodals method) (lnpy.stability.Spinodals method) A access (lnpy.stability.StabilityBase attribute) AccessorMixin (class in lnpy.extensions) adjust() (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy method) and_mask() (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy method) (lnpy.lnpidata.lnPiMasked method) append() (lnpy.lnpiseries.lnPiCollection method) append_to_parent() (lnpy.stability.StabilityBase method) appender (lnpy.stability.StabilityBase property) apply() (lnpy.lnpiseries.lnPiCollection method) B beta (lnpy.ensembles.GrandCanonicalEnsemble property) (lnpy.lnpidata.lnPiMasked property) betaE() (lnpy.ensembles.CanonicalEnsemble method) (lnpy.ensembles.GrandCanonicalEnsemble method) betaE_n() (lnpy.ensembles.CanonicalEnsemble method) (lnpy.ensembles.GrandCanonicalEnsemble method) betaF() (lnpy.ensembles.CanonicalEnsemble method) (lnpy.ensembles.GrandCanonicalEnsemble method) betaF_alt() (lnpy.ensembles.GrandCanonicalEnsemble method) betaF_n() (lnpy.ensembles.CanonicalEnsemble method) (lnpy.ensembles.GrandCanonicalEnsemble method) betaG (lnpy.ensembles.GrandCanonicalEnsemble property) betaG_n (lnpy.ensembles.GrandCanonicalEnsemble property) betamu (lnpy.ensembles.GrandCanonicalEnsemble attribute) (lnpy.lnpidata.lnPiMasked property) betamu() (lnpy.ensembles.CanonicalEnsemble method) betaOmega() (lnpy.ensembles.CanonicalEnsemble method) (lnpy.ensembles.GrandCanonicalEnsemble method) betaOmega_n() (lnpy.ensembles.CanonicalEnsemble method) (lnpy.ensembles.GrandCanonicalEnsemble method) betapV() (lnpy.ensembles.CanonicalEnsemble method) (lnpy.ensembles.GrandCanonicalEnsemble method) binodal (lnpy.lnpiseries.lnPiCollection attribute) Binodals (class in lnpy.stability) build_phases (lnpy.examples.Example attribute) build_phases() (lnpy.segment.PhaseCreator method) build_phases_dmu() (lnpy.segment.PhaseCreator method) build_phases_mu() (lnpy.segment.PhaseCreator method) BuildPhases_dmu (class in lnpy.segment) BuildPhases_mu (class in lnpy.segment) BuildPhasesBase (class in lnpy.segment) C CanonicalEnsemble (class in lnpy.ensembles) concat() (lnpy.lnpiseries.lnPiCollection class method) concat_like() (lnpy.lnpiseries.lnPiCollection method) copy_shallow() (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy method) D data (lnpy.lnpidata.lnPiMasked property) dataset_to_lnpimasked() (in module lnpy.core.utils) decorate_accessor() (lnpy.extensions.AccessorMixin class method) (lnpy.lnpidata.lnPiMasked class method) delta_w (lnpy.lnpienergy.wFreeEnergy attribute) dens (lnpy.ensembles.CanonicalEnsemble property) (lnpy.ensembles.GrandCanonicalEnsemble property) dens_tot (lnpy.ensembles.GrandCanonicalEnsemble property) dims_comp (lnpy.ensembles.GrandCanonicalEnsemble property) dims_lnz (lnpy.ensembles.GrandCanonicalEnsemble property) dims_n (lnpy.ensembles.GrandCanonicalEnsemble property) dims_rec (lnpy.ensembles.GrandCanonicalEnsemble property) dims_state (lnpy.ensembles.GrandCanonicalEnsemble property) distance_matrix() (in module lnpy.core.utils) droplevel() (lnpy.lnpiseries.lnPiCollection method) dtype (lnpy.lnpidata.lnPiMasked property) dw (lnpy.lnpienergy.wFreeEnergyCollection property) (lnpy.lnpienergy.wFreeEnergyPhases property) dwx (lnpy.lnpienergy.wFreeEnergyCollection property) (lnpy.lnpienergy.wFreeEnergyPhases property) E edge_distance() (lnpy.ensembles.GrandCanonicalEnsemble method) (lnpy.lnpidata.lnPiMasked method) edge_distance_matrix (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy attribute) (lnpy.lnpidata.lnPiMasked attribute) edge_distance_val() (lnpy.ensembles.GrandCanonicalEnsemble method) EnsembleT (class in lnpy.core.typing) Example (class in lnpy.examples) ExampleDict (class in lnpy.examples) extra_kws (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy property) (lnpy.lnpidata.lnPiMasked property) F filled() (lnpy.lnpidata.lnPiMasked method) find_boundaries() (in module lnpy.lnpienergy) find_boundaries_overlap() (in module lnpy.lnpienergy) find_masked_extrema() (in module lnpy.lnpienergy) from_builder() (lnpy.lnpiseries.lnPiCollection class method) from_data() (lnpy.lnpidata.lnPiMasked class method) from_dataarray() (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy class method) (lnpy.lnpidata.lnPiMasked class method) (lnpy.lnpiseries.lnPiCollection class method) from_labels() (lnpy.lnpienergy.wFreeEnergy class method) (lnpy.lnpiseries.lnPiCollection class method) from_list() (lnpy.lnpiseries.lnPiCollection class method) from_table() (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy class method) (lnpy.lnpidata.lnPiMasked class method) G get_dw() (lnpy.lnpienergy.wFreeEnergyCollection method) (lnpy.lnpienergy.wFreeEnergyPhases method) get_dwx() (lnpy.lnpienergy.wFreeEnergyCollection method) (lnpy.lnpienergy.wFreeEnergyPhases method) get_index_level() (lnpy.lnpiseries.lnPiCollection method) get_lnz_iter() (in module lnpy.core.utils) get_spinodal() (in module lnpy.stability) GrandCanonicalEnsemble (class in lnpy.ensembles) groupby() (lnpy.lnpiseries.lnPiCollection method) groupby_allbut() (lnpy.lnpiseries.lnPiCollection method) H hsmix_example() (in module lnpy.examples) I index (lnpy.lnpiseries.lnPiCollection property) (lnpy.segment.BuildPhases_dmu property) (lnpy.segment.BuildPhases_mu property) (lnpy.segment.BuildPhasesBase property) index_frame (lnpy.lnpiseries.lnPiCollection attribute) items (lnpy.lnpiseries.lnPiCollection property) (lnpy.stability.StabilityBase property) J json_to_dict() (in module lnpy.examples) L labels_to_masks() (in module lnpy.core.mask) list_from_labels() (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy method) (lnpy.lnpidata.lnPiMasked method) list_from_masks() (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy method) (lnpy.lnpidata.lnPiMasked method) lj_sub_example() (in module lnpy.examples) lj_sup_example() (in module lnpy.examples) ljmix_sup_example() (in module lnpy.examples) lnPi module lnpi() (lnpy.ensembles.CanonicalEnsemble method) (lnpy.ensembles.GrandCanonicalEnsemble method) lnPi.maskedlnpi_legacy module lnpi_max() (lnpy.ensembles.GrandCanonicalEnsemble method) lnpi_norm (lnpy.ensembles.GrandCanonicalEnsemble property) lnPiArray (class in lnpy.lnpidata) lnPiCollection (class in lnpy.lnpiseries) lnPiMasked (class in lnpy.lnpidata) lnpimasked_to_dataset() (in module lnpy.core.utils) lnpy module lnpy.combine module lnpy.core.mask module lnpy.core.rootresults module lnpy.core.typing module lnpy.core.utils module lnpy.ensembles module lnpy.examples module lnpy.lnpidata module lnpy.lnpienergy module lnpy.lnpiseries module lnpy.options module lnpy.segment module lnpy.stability module lnz (lnpy.ensembles.GrandCanonicalEnsemble property) (lnpy.lnpidata.lnPiMasked property) load_example_dict() (in module lnpy.examples) load_example_lnpimasked() (in module lnpy.examples) local_argmax() (lnpy.lnpidata.lnPiMasked method) local_max() (lnpy.lnpidata.lnPiMasked method) local_maxmask() (lnpy.lnpidata.lnPiMasked method) LogPiWrapper (class in lnpy.ensembles) M ma (lnpy.lnpidata.lnPiMasked property) mask (lnpy.lnpidata.lnPiMasked property) mask_change_convention() (in module lnpy.core.mask) mask_stable (lnpy.ensembles.GrandCanonicalEnsemble attribute) MaskConvention (in module lnpy.core.typing) MaskedlnPiLegacy (class in lnPi.maskedlnpi_legacy) masks_change_convention() (in module lnpy.core.mask) masks_to_labels() (in module lnpy.core.mask) max() (lnpy.ensembles.GrandCanonicalEnsemble method) mean_pi() (lnpy.ensembles.GrandCanonicalEnsemble method) merge_regions() (in module lnpy.lnpienergy) (lnpy.lnpienergy.wFreeEnergy method) module lnPi lnPi.maskedlnpi_legacy lnpy lnpy.combine lnpy.core.mask lnpy.core.rootresults lnpy.core.typing lnpy.core.utils lnpy.ensembles lnpy.examples lnpy.lnpidata lnpy.lnpienergy lnpy.lnpiseries lnpy.options lnpy.segment lnpy.stability molfrac (lnpy.ensembles.GrandCanonicalEnsemble property) N name (lnpy.lnpiseries.lnPiCollection property) ncoords (lnpy.ensembles.CanonicalEnsemble attribute) (lnpy.ensembles.GrandCanonicalEnsemble property) ncoords_tot (lnpy.ensembles.GrandCanonicalEnsemble property) NDArrayAny (in module lnpy.core.typing) new_like() (lnpy.lnpidata.lnPiArray method) (lnpy.lnpidata.lnPiMasked method) (lnpy.lnpiseries.lnPiCollection method) nfeature (lnpy.lnpienergy.wFreeEnergy property) nlnz (lnpy.lnpiseries.lnPiCollection property) ntot (lnpy.ensembles.CanonicalEnsemble attribute) (lnpy.ensembles.GrandCanonicalEnsemble attribute) ntot_var (lnpy.ensembles.GrandCanonicalEnsemble attribute) nvec (lnpy.ensembles.CanonicalEnsemble property) (lnpy.ensembles.GrandCanonicalEnsemble attribute) nvec_var (lnpy.ensembles.GrandCanonicalEnsemble attribute) O optinfo (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy property) Options (class in lnpy.options) OptionsReq (class in lnpy.options) or_mask() (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy method) (lnpy.lnpidata.lnPiMasked method) P pad() (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy method) (lnpy.lnpidata.lnPiArray method) (lnpy.lnpidata.lnPiMasked method) parent (lnpy.stability.StabilityBase property) PE (lnpy.ensembles.CanonicalEnsemble attribute) (lnpy.ensembles.GrandCanonicalEnsemble attribute) PE_n (lnpy.ensembles.CanonicalEnsemble property) (lnpy.ensembles.GrandCanonicalEnsemble property) peak_local_max_adaptive() (in module lnpy.segment) peaks() (lnpy.segment.Segmenter method) peek_at() (in module lnpy.core.utils) phase_creator (lnpy.examples.Example attribute) PhaseCreator (class in lnpy.segment) PhasesFactorySignature (in module lnpy.core.typing) pi_norm (lnpy.ensembles.GrandCanonicalEnsemble property) pi_norm_max() (lnpy.ensembles.GrandCanonicalEnsemble method) pi_sum (lnpy.ensembles.GrandCanonicalEnsemble property) pipe() (lnpy.ensembles.GrandCanonicalEnsemble method) pressure() (lnpy.ensembles.CanonicalEnsemble method) (lnpy.ensembles.GrandCanonicalEnsemble method) R ref (lnpy.examples.Example attribute) register_accessor() (lnpy.extensions.AccessorMixin class method) (lnpy.lnpidata.lnPiMasked class method) reweight() (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy method) (lnpy.lnpidata.lnPiMasked method) RootResultDict (class in lnpy.core.rootresults) RootResultDictReq (class in lnpy.core.rootresults) rootresults_to_rootresultdict() (in module lnpy.core.rootresults) RootResultTotal (class in lnpy.stability) S s (lnpy.lnpiseries.lnPiCollection property) S() (lnpy.ensembles.CanonicalEnsemble method) (lnpy.ensembles.GrandCanonicalEnsemble method) S_n() (lnpy.ensembles.CanonicalEnsemble method) (lnpy.ensembles.GrandCanonicalEnsemble method) segment_lnpi() (lnpy.segment.Segmenter method) Segmenter (class in lnpy.segment) series (lnpy.lnpiseries.lnPiCollection property) set_options (class in lnpy.options) shape (lnpy.lnpidata.lnPiMasked property) smooth() (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy method) sort_index() (lnpy.lnpiseries.lnPiCollection method) spinodal (lnpy.lnpiseries.lnPiCollection attribute) Spinodals (class in lnpy.stability) StabilityBase (class in lnpy.stability) state_kws (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy property) (lnpy.lnpidata.lnPiMasked property) (lnpy.lnpiseries.lnPiCollection property) T table() (lnpy.ensembles.CanonicalEnsemble method) (lnpy.ensembles.GrandCanonicalEnsemble method) TagPhasesSignature (in module lnpy.core.typing) to_dataarray() (lnpy.lnpiseries.lnPiCollection method) to_dict() (lnpy.examples.Example method) U unpack() (lnpy.examples.Example method) V Validators (class in lnpy.options) values (lnpy.lnpiseries.lnPiCollection property) var_pi() (lnpy.ensembles.GrandCanonicalEnsemble method) volume (lnpy.ensembles.GrandCanonicalEnsemble property) (lnpy.lnpidata.lnPiMasked property) W w_argmin (lnpy.lnpienergy.wFreeEnergy property) (lnpy.lnpienergy.wFreeEnergyCollection property) (lnpy.lnpienergy.wFreeEnergyPhases property) w_argtran (lnpy.lnpienergy.wFreeEnergy property) (lnpy.lnpienergy.wFreeEnergyCollection property) (lnpy.lnpienergy.wFreeEnergyPhases property) w_min (lnpy.lnpienergy.wFreeEnergy property) (lnpy.lnpienergy.wFreeEnergyCollection property) (lnpy.lnpienergy.wFreeEnergyPhases property) w_tran (lnpy.lnpienergy.wFreeEnergy property) (lnpy.lnpienergy.wFreeEnergyCollection property) (lnpy.lnpienergy.wFreeEnergyPhases property) watershed() (lnpy.segment.Segmenter method) wfe (lnpy.lnpiseries.lnPiCollection attribute) wfe_phases (lnpy.lnpiseries.lnPiCollection attribute) wFreeEnergy (class in lnpy.lnpienergy) wFreeEnergyCollection (class in lnpy.lnpienergy) wFreeEnergyPhases (class in lnpy.lnpienergy) wlnPi (lnpy.lnpiseries.lnPiCollection property) wlnPi_single (lnpy.lnpiseries.lnPiCollection property) wrap_list_results() (lnpy.lnpiseries.lnPiCollection method) X xce (lnpy.lnpidata.lnPiMasked attribute) xge (lnpy.lnpidata.lnPiMasked attribute) (lnpy.lnpiseries.lnPiCollection attribute) xr_name() (in module lnpy.ensembles) xs() (lnpy.lnpiseries.lnPiCollection method) Z Z() (lnpy.ensembles.CanonicalEnsemble method) (lnpy.ensembles.GrandCanonicalEnsemble method) zeromax() (lnPi.maskedlnpi_legacy.MaskedlnPiLegacy method) (lnpy.lnpidata.lnPiArray method) (lnpy.lnpidata.lnPiMasked method)