- Cells
- Model
- BondFourBody
- RigidDihedral
- BondThreeBody
- RigidAngle
- AngleSquareWell
- BondTwoBody
- RigidBond
- BondSquareWell
- BondVisitor
- CutoffOuter
- ModelOneBody
- ModelEmpty
- ModelThreeBody
- ModelTwoBody
- IdealGas
- HardSphere
- LennardJones
- ModelTwoBodyFactory
- ModelTwoBodyTable
- Potential
Potential
group_index()
cell_index()
Potential()
model()
Potential()
visit_model()
Potential()
set()
set_model_params()
set_model_param()
set_model_param()
model_params()
model_params()
does_cutoff_fit_domain()
precompute()
energy()
select_energy()
stored_energy()
set_stored_energy()
change_volume()
revert()
finalize()
cache()
load_cache()
unload_cache()
serialize()
Potential()
- PotentialFactory
- SynchronizeData
- EnergyMap
- System
System
set()
thermo_params()
set_beta()
change_volume()
delta_volume_previous()
total_volume()
revert()
finalize()
load_cache()
unload_cache()
status_header()
status()
check()
serialize()
System()
add()
num_configurations()
configuration()
dimension()
add()
set_unoptimized()
add_to_unoptimized()
unoptimized()
potential()
add_to_optimized()
optimized()
add_to_reference()
num_references()
reference()
references()
potentials()
remove_opt_overlap()
add()
neighbor_criteria()
neighbor_criteria()
precompute()
unoptimized_energy()
energy()
perturbed_energy()
stored_energy()
stored_energy_profile()
reference_energy()
reference_energy()
System()
- ThermoParams
- VisitModel
- DontVisitModel
- LongRangeCorrections
- VisitModelBond
- VisitModelCell
- VisitModelCutoffOuter
- VisitModelInner
- VisitModelIntra
- VisitModelIntraMap