MonatomicIon
============

.. currentmodule:: mbuild_polybuild.aa_molecules.ion

mbuild_polybuild.aa_molecules.ion.MonatomicIon

.. autoclass:: MonatomicIon
   :members:
   :show-inheritance:

   
   
   
      .. autosummary::
         :toctree:
      
         MonatomicIon.box
         MonatomicIon.center
         MonatomicIon.charge
         MonatomicIon.element
         MonatomicIon.mass
         MonatomicIon.maxs
         MonatomicIon.mins
         MonatomicIon.n_bonds
         MonatomicIon.n_direct_bonds
         MonatomicIon.n_particles
         MonatomicIon.periodicity
         MonatomicIon.pos
         MonatomicIon.root
         MonatomicIon.xyz
         MonatomicIon.xyz_with_ports
   
   

   
      .. autosummary::
         :toctree:
      
         MonatomicIon.add
         MonatomicIon.add_bond
         MonatomicIon.all_ports
         MonatomicIon.ancestors
         MonatomicIon.available_ports
         MonatomicIon.bonds
         MonatomicIon.check_for_overlap
         MonatomicIon.condense
         MonatomicIon.direct_bonds
         MonatomicIon.energy_minimize
         MonatomicIon.flatten
         MonatomicIon.freud_generate_bonds
         MonatomicIon.from_gmso
         MonatomicIon.from_parmed
         MonatomicIon.from_pybel
         MonatomicIon.from_trajectory
         MonatomicIon.generate_bonds
         MonatomicIon.get_boundingbox
         MonatomicIon.get_smiles
         MonatomicIon.is_independent
         MonatomicIon.min_periodic_distance
         MonatomicIon.particles
         MonatomicIon.particles_by_element
         MonatomicIon.particles_by_name
         MonatomicIon.particles_in_range
         MonatomicIon.print_hierarchy
         MonatomicIon.referenced_ports
         MonatomicIon.remove
         MonatomicIon.remove_bond
         MonatomicIon.reset_labels
         MonatomicIon.rotate
         MonatomicIon.rotate_dihedral
         MonatomicIon.save
         MonatomicIon.spin
         MonatomicIon.successors
         MonatomicIon.to_freud
         MonatomicIon.to_gmso
         MonatomicIon.to_hoomdsnapshot
         MonatomicIon.to_intermol
         MonatomicIon.to_networkx
         MonatomicIon.to_parmed
         MonatomicIon.to_pybel
         MonatomicIon.to_rdkit
         MonatomicIon.to_smiles
         MonatomicIon.to_trajectory
         MonatomicIon.translate
         MonatomicIon.translate_to
         MonatomicIon.update_coordinates
         MonatomicIon.visualize