TFTP
====

.. currentmodule:: mbuild_polybuild.aa_functional_groups.tftp

mbuild_polybuild.aa_functional_groups.tftp.TFTP

.. autoclass:: TFTP
   :members:
   :show-inheritance:

   
   
   
      .. autosummary::
         :toctree:
      
         TFTP.box
         TFTP.center
         TFTP.charge
         TFTP.element
         TFTP.mass
         TFTP.maxs
         TFTP.mins
         TFTP.n_bonds
         TFTP.n_direct_bonds
         TFTP.n_particles
         TFTP.periodicity
         TFTP.pos
         TFTP.root
         TFTP.xyz
         TFTP.xyz_with_ports
   
   

   
      .. autosummary::
         :toctree:
      
         TFTP.add
         TFTP.add_bond
         TFTP.all_ports
         TFTP.ancestors
         TFTP.available_ports
         TFTP.bonds
         TFTP.check_for_overlap
         TFTP.condense
         TFTP.direct_bonds
         TFTP.energy_minimize
         TFTP.flatten
         TFTP.freud_generate_bonds
         TFTP.from_gmso
         TFTP.from_parmed
         TFTP.from_pybel
         TFTP.from_trajectory
         TFTP.generate_bonds
         TFTP.get_boundingbox
         TFTP.get_smiles
         TFTP.is_independent
         TFTP.min_periodic_distance
         TFTP.particles
         TFTP.particles_by_element
         TFTP.particles_by_name
         TFTP.particles_in_range
         TFTP.print_hierarchy
         TFTP.referenced_ports
         TFTP.remove
         TFTP.remove_bond
         TFTP.reset_labels
         TFTP.rotate
         TFTP.rotate_dihedral
         TFTP.save
         TFTP.spin
         TFTP.successors
         TFTP.to_freud
         TFTP.to_gmso
         TFTP.to_hoomdsnapshot
         TFTP.to_intermol
         TFTP.to_networkx
         TFTP.to_parmed
         TFTP.to_pybel
         TFTP.to_rdkit
         TFTP.to_smiles
         TFTP.to_trajectory
         TFTP.translate
         TFTP.translate_to
         TFTP.update_coordinates
         TFTP.visualize