MHTA
====

.. currentmodule:: mbuild_polybuild.aa_functional_groups.mhta

mbuild_polybuild.aa_functional_groups.mhta.MHTA

.. autoclass:: MHTA
   :members:
   :show-inheritance:

   
   
   
      .. autosummary::
         :toctree:
      
         MHTA.box
         MHTA.center
         MHTA.charge
         MHTA.element
         MHTA.mass
         MHTA.maxs
         MHTA.mins
         MHTA.n_bonds
         MHTA.n_direct_bonds
         MHTA.n_particles
         MHTA.periodicity
         MHTA.pos
         MHTA.root
         MHTA.xyz
         MHTA.xyz_with_ports
   
   

   
      .. autosummary::
         :toctree:
      
         MHTA.add
         MHTA.add_bond
         MHTA.all_ports
         MHTA.ancestors
         MHTA.available_ports
         MHTA.bonds
         MHTA.check_for_overlap
         MHTA.condense
         MHTA.direct_bonds
         MHTA.energy_minimize
         MHTA.flatten
         MHTA.freud_generate_bonds
         MHTA.from_gmso
         MHTA.from_parmed
         MHTA.from_pybel
         MHTA.from_trajectory
         MHTA.generate_bonds
         MHTA.get_boundingbox
         MHTA.get_smiles
         MHTA.is_independent
         MHTA.min_periodic_distance
         MHTA.particles
         MHTA.particles_by_element
         MHTA.particles_by_name
         MHTA.particles_in_range
         MHTA.print_hierarchy
         MHTA.referenced_ports
         MHTA.remove
         MHTA.remove_bond
         MHTA.reset_labels
         MHTA.rotate
         MHTA.rotate_dihedral
         MHTA.save
         MHTA.spin
         MHTA.successors
         MHTA.to_freud
         MHTA.to_gmso
         MHTA.to_hoomdsnapshot
         MHTA.to_intermol
         MHTA.to_networkx
         MHTA.to_parmed
         MHTA.to_pybel
         MHTA.to_rdkit
         MHTA.to_smiles
         MHTA.to_trajectory
         MHTA.translate
         MHTA.translate_to
         MHTA.update_coordinates
         MHTA.visualize