Source code for AFL.automation.mixing.PipetteAction

import copy



class PipetteAction:


    def __init__(self,
                 source,
                 dest,
                 volume,
                 source_loc=None,
                 dest_loc=None,
                 aspirate_rate=None,
                 dispense_rate=None,
                 mix_aspirate_rate=None,
                 mix_dispense_rate=None,
                 mix_before=None,
                 mix_after=None,
                 blow_out=False,
                 post_aspirate_delay=0.0,
                 post_dispense_delay=0.0,
                 aspirate_equilibration_delay=0.0,
                 drop_tip=True,
                 force_new_tip=False,
                 to_top=True,
                 to_center=False,
                 to_top_z_offset=0,
                 fast_mixing=False

                 ):
        self.kwargs = {}
        self.kwargs['source'] = source
        self.kwargs['dest'] = dest
        self.kwargs['volume'] = volume
        self.kwargs['source_loc'] = source_loc
        self.kwargs['dest_loc'] = dest_loc
        self.kwargs['mix_before'] = mix_before
        self.kwargs['mix_after'] = mix_after
        self.kwargs['aspirate_rate'] = aspirate_rate
        self.kwargs['dispense_rate'] = dispense_rate
        self.kwargs['mix_aspirate_rate'] = mix_aspirate_rate
        self.kwargs['mix_dispense_rate'] = mix_dispense_rate
        self.kwargs['blow_out'] = blow_out
        self.kwargs['post_aspirate_delay'] = post_aspirate_delay
        self.kwargs['post_dispense_delay'] = post_dispense_delay
        self.kwargs['aspirate_equilibration_delay'] = aspirate_equilibration_delay
        self.kwargs['drop_tip'] = drop_tip
        self.kwargs['force_new_tip'] = force_new_tip
        self.kwargs['to_top'] = to_top
        self.kwargs['to_center'] = to_center
        self.kwargs['to_top_z_offset'] = to_top_z_offset  # mm!
        self.kwargs['fast_mixing'] = fast_mixing


    def __str__(self):
        return f'<PipetteAction Vol:{self.volume:4.3f} {self.source}-->{self.dest}>'

    def __repr__(self):
        return self.__str__()

    def __getattr__(self, name):
        if name in self.kwargs:
            return self.kwargs[name]
        else:
            return getattr(self, name)



    def emit_protocol(self):
        return self.get_kwargs()




    def get_kwargs(self):
        kw = copy.deepcopy(self.kwargs)
        if kw['source_loc'] is None:
            del kw['source_loc']
        if kw['dest_loc'] is None:
            del kw['dest_loc']
        return kw